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DNA BASER |
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Category: Education | Size: 1.3MB | Released: 07/2007
Easy to use aligner software for DNA sequence contig assembly, contig editing, and mutation detection for Windows. It is a molecular biology software that can view and assemble sequences in contigs. Features: end clip, export, assemblies, detection.
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Details
Description: Easy to use aligner software for DNA sequence contig assembly, contig editing, and mutation detection for Windows. It is a molecular biology software that can view and assemble sequences in contigs.Features: end clip, export sequences, assemblies, code detection.
Description: DNA Baser is an affordable alternative for assembly of DNA sequences and generation of contigs. File formats supported are abi, scf and seq (or FASTA). Chromatograms of the assembled sequences are displayed in a synchronized format with the generated contig. Ambiguous bases in the contig are highlighted and corrections are suggested by DNABaser based on Quality Values of the trace files. Minimum input from the user required. Editing of ambiguous bases, including insertion and deletion, is possible. The settings of the assembly engine can be adjusted by the user. The user can personalize the appearance of chromatograms, nucleotides, background. The Quality Values of the trace files are displayed above chromatograms, so that the user can easily decide on the corrections in the final contig. Original chromatogram files are automatically trimmed based on Quality Values. The contig is automatically saved in FASTA format, in the same directory with the original trace files. By using a built up database of primer and vector sequences, that can be edited upgraded by the user, DNABaser can be set to automatically trim the vector sequence out of the final contig.
Description: Easy to use aligner software for DNA sequencing tool, contig editing, and mutation detection for Windows. It is a molecular biology software that can view and assemble sequences in contigs.Features: end clip, export sequences, assemblies, code detection. It is a price alternative for DNA contig assembly. Download freeware tools for file conversion. trim vector sequence free program align alignment base convert consensus sequencing trace mac os x windows mutation primer, real time pcr quality.
OS Support: Win95,Win98,WinME,WinNT 3.x,WinNT 4.x,Windows2000,WinXP,Windows2003,Windows Vista Starter,Windows Vista Home Basic,Windows Vista Home Premium,Windows Vista Business,Windows Vista Enterprise,Windows Vista Ultimate,Windows Vista Home Basic x64,Windows Vista Home Premium x64,Windows Vista Business x64,Windows Vista Enterprise x64,Windows Vista Ultimate x64,Linux,Mac OS X,Mac OS X 10.1,Mac OS X 10.2,Mac OS X 10.3,Mac OS X 10.4,Mac OS X 10.5,Mac Other
Keywords: DNA sequence assembly, contig editing, DNA, sequence, assembly, software, alignment, contig, basecaller, base, caller, phred, code, codone, align, abi, scf, seq, ab, sequencing
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DNA BASER
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